RECENT PUBLICATIONS - Fall 2018


  • Belovsky, G; Slade, J. 2018. Grasshoppers affect grassland ecosystem functioning: Spatial and temporal variation. Basic and Applied Ecology 26. Doi.org/10.1016/j.baae.2017.09.003

  • Bershteyn, A; Gerardin, J; Bridenbecker, D; Lorton, C; Bloedow, J; Baker, R; Chabot-Couture, G; Chen, Y; Fischle, T; Frey, K; Gauld, J; Hu, H; Izzo, A; Klein, D; Lukacevic, D; McCarthy, K; Miller, J; Ouedraogo, A; Perkins, T; Steinkraus, J; ten Bosch, Q; Ting, H; Titova, S; Wagner, B; Welkhoff, P; Wenger, E; Wiswell, C. 2018. Implementation and applications of EMOD, an individual-based multi-disease modeling platform. Pathogens and Disease 76(5). Doi.org/10.1093/femspd/fty059

  • Broderick, C; Heilman, K; Patterson, T; Peters, J; McLachlan, J. 2018. Sharp Savanna-forest Transitions in the Midwest Followed Environmental Gradients but are Absent from the Modern Landscape. American Midland Naturalist 180(1). Doi.org/10.1674/0003-0031-180.1.1

  • Cannon, C; Brendel, O; Deng, M; Hipp, A; Kremer, A; Kua, C; Plomion, C; Romero-Severson, J; Sork, V. 2018. Gaining a global perspective on Fagaceae genomic diversification and adaptation. New Phytologist 218(3). Doi.org/10.1111/nph.15101

  • Castruccio, S; Genton, M. 2018. Principles for statistical inference on big spatio-temporal data from climate models. Statistics & Probability Letters 136. Doi.org/10.1016/j.spl.2018.02.026

  • Cha, D; Powell, T; Feder, J; Linn, C. 2018. Identification of a New Blend of Host Fruit Volatiles from Red Downy Hawthorn, Crataegus mollis, Attractive to Rhagoletis pomonella Flies from the Northeastern United States. Journal of Chemical Ecology 44(43289). Doi.org/10.1007/s10886-018-0977-6

  • Chen, W; Castruccio, S; Genton, M; Crippa, P. 2018. Current and Future Estimates of Wind Energy Potential Over Saudi Arabia. Journal of Geophysical Research-Atmospheres 123(12). Doi.org/10.1029/2017JD028212

  • Chen, Y; Gao, P; Summe, M; Phillip, W; Wei, N. 2018. Biocatalytic membranes prepared by inkjet printing functionalized yeast cells onto microfiltration substrates. Journal of Membrane Science 550. Doi.org/10.1016/j.memsci.2017.12.045

  • Chen, Y; Gao, P; Summe, M; Phillip, W; Wei, N. 2018. Biocatalytic membranes prepared by inkjet printing functionalized yeast cells onto microfiltration substrates. Abstracts of Papers of The American Chemical Society 255. Doi.org/

  • Chen, Y; Wu, Y; Zhu, B; Zhang, G; Wei, N. 2018. Co-fermentation of cellobiose and xylose by mixed culture of recombinant Saccharomyces cerevisiae and kinetic modeling. Plos One 13(6). Doi.org/10.1371/journal.pone.0199104

  • Doellman, M; Ragland, G; Hood, G; Meyers, P; Egan, S; Powell, T; Lazorchak, P; Glover, M; Tait, C; Schuler, H; Hahn, D; Berlocher, S; Smith, J; Nosil, P; Feder, J. 2018. Genomic Differentiation during Speciation-with-Gene-Flow: Comparing Geographic and Host-Related Variation in Divergent Life History Adaptation in Rhagoletis pomonella. Genes 9(5). Doi.org/10.3390/genes9050262

  • Espana, G; Grefenstette, J; Perkins, A; Torres, C; Campo Carey, A; Diaz, H; de la Hoz, F; Burke, D; van Panhuis, W. 2018. Exploring scenarios of chikungunya mitigation with a data-driven agent-based model of the 2014-2016 outbreak in Colombia. Scientific Reports 8. Doi.org/10.1038/s41598-018-30647-8

  • Fakhari, A; Li, Y; Bolster, D; Christensen, K. 2018. A phase-field lattice Boltzmann model for simulating multiphase flows in porous media: Application and comparison to experiments of CO2 sequestration at pore scale. Advances In Water Resources 114. Doi.org/10.1016/j.advwatres.2018.02.005

  • Gerig, B; Chaloner, D; Janetski, D; Moerke, A; Rediske, R; O'Keefe, J; Pitts, D; Lamberti, G. 2018. Environmental context and contaminant biotransport by Pacific salmon interact to mediate the bioaccumulation of contaminants by stream-resident fish. Journal of Applied Ecology 55(4). Doi.org/10.1111/1365-2664.13123

  • Gerig, B; Weber, D; Chaloner, D; McGill, L; Lamberti, G. 2018. Interactive effects of introduced Pacific salmon and brown trout on native brook trout: an experimental and modeling approach. Canadian Journal of Fisheries and Aquatic Sciences 75(4). Doi.org/10.1139/cjfas-2016-0502

  • Gesquiere, L; Altmann, J; Archie, E; Alberts, S. 2018. Interbirth intervals in wild baboons: Environmental predictors and hormonal correlates. American Journal of Physical Anthropology 166(1). Doi.org/10.1002/ajpa.23407

  • Ghouila, A; Siwo, G; Entfellner, J; Panji, S; Button-Simons, K; Davis, S; Fadlelmola, F; Ferdig, M; Mulder, N. 2018. Hackathons as a means of accelerating scientific discoveries and knowledge transfer. Genome Research 28(5). Doi.org/10.1101/gr.228460.117

  • Goldshmid, R; Bardoel, S; Hocut, C; Zhong, Q; Liberzon, D; Fernando, H. 2018. Separation of Upslope Flow over a Plateau. Atmosphere 9(5). Doi.org/10.3390/atmos9050165

  • Grachev, A; Leo, L; Fernando, H; Fairall, C; Creegan, E; Blomquist, B; Christman, A; Hocut, C. 2018. Air-Sea/Land Interaction in the Coastal Zone. Boundary-Layer Meteorology 167(2). Doi.org/10.1007/s10546-017-0326-2

  • Grey, E; Bernatchez, L; Cassey, P; Deiner, K; Deveney, M; Howland, K; Lacoursiere-Roussel, A; Leong, S; Li, Y; Olds, B; Pfrender, M; Prowse, T; Renshaw, M; Lodge, D. 2018. Effects of sampling effort on biodiversity patterns estimated from environmental DNA metabarcoding surveys. Scientific Reports 8. Doi.org/10.1038/s41598-018-27048-2

  • Habig, B; Doellman, M; Woods, K; Olansen, J; Archie, E. 2018. Social status and parasitism in male and female vertebrates: a meta-analysis. Scientific Reports 8. Doi.org/10.1038/s41598-018-21994-7

  • Hall, E; Bernhardt, E; Bier, R; Bradford, M; Boot, C; Cotner, J; del Giorgio, P; Evans, S; Graham, E; Jones, S; Lennon, J; Locey, K; Nemergut, D; Osborne, B; Rocca, J; Schimel, J; Waldrop, M; Wallenstein, M. 2018. Understanding how microbiomes influence the systems they inhabit. Nature Microbiology 3(9). Doi.org/10.1038/s41564-018-0201-z

  • Hallas, J; Feldman, C; Brodie, E; Pfrender, M; Brodie, E; Parchman, T. 2018. Adaptive Variation in the Sierra Garter Snake (Thamnophis couchii): Influence of Biogeography and Genetic Structure on Patterns of TTX-Resistance. Integrative and Comparative Biology 58. 

  • Hanrahan, B; Tank, J; Aubeneau, A; Bolster, D. 2018. Substrate-specific biofilms control nutrient uptake in experimental streams. Freshwater Science 37(3). Doi.org/10.1086/699004

  • Hanrahan, B; Tank, J; Christopher, S; Mahl, U; Trentman, M; Royer, T. 2018. Winter cover crops reduce nitrate loss in an agricultural watershed in the central U.S. Agriculture Ecosystems & Environment 265. Doi.org/10.1016/j.agee.2018.07.004

  • Hararuk, O; Zwart, J; Jones, S; Prairie, Y; Solomon, C. 2018. Model-Data Fusion to Test Hypothesized Drivers of Lake Carbon Cycling Reveals Importance of Physical Controls. Journal of Geophysical Research-Biogeosciences 123(3). Doi.org/10.1002/2017JG004084

  • Jeong, J; Castruccio, S;Crippa, P; Genton, M. 2018. Reducing storage of global wind ensembles with stochastic generators. Annals of Applied Statistics 12(1). Doi.org/10.1214/17-AOAS1105

  • Jeong, S; Bloom, A; Schimel, D; Sweeney, C; Parazoo, N; Medvigy, D; Schaepman-Strub, G; Zheng, C; Schwalm, C; Huntzinger, D; Michalak, A; Miller, C. 2018. Accelerating rates of Arctic carbon cycling revealed by long-term atmospheric CO2 measurements. Science Advances 4(7). Doi.org/10.1126/sciadv.aao1167

  • Kang, D; Barron, M; Lovin, D; Cunningham, J; Eng, M; Chadee, D; Li, J; Severson, D. 2018. A transcriptomic survey of the impact of environmental stress on response to dengue virus in the mosquito, Aedes aegypti. Plos Neglected Tropical Diseases 12(6). Doi.org/10.1371/journal.pntd.0006568

  • Khanna, J; Medvigy, D; Fisch, G; de Araujo Tiburtino Neves, T. 2018. Regional Hydroclimatic Variability Due To Contemporary Deforestation in Southern Amazonia and Associated Boundary Layer Characteristics. Journal of Geophysical Research-Atmospheres 123(8). Doi.org/10.1002/2017JD027888

  • Kraemer, M; Bisanzio, D; Reiner, R; Zakar, R; Hawkins, J; Freifeld, C; Smith, D; Hay, S; Brownstein, J; Perkins, T. 2018. Inferences about spatiotemporal variation in dengue virus transmission are sensitive to assumptions about human mobility: a case study using geolocated tweets from Lahore, Pakistan. Epj Data Science 7. Doi.org/10.1140/epjds/s13688-018-0144-x

  • Li, K; Nabrzyski, J. 2018. Virtual Machine Placement in Cloudlet Mesh. Journal of Communications and Networks 20(3). Doi.org/10.1109/JCN.2018.000039

  • Li, X; Xiao, J; He, B; Arain, M; Beringer, J; Desai, A; Emmel, C; Hollinger, D; Krasnova, A; Mammarella, I; Noe, S; Serrano Ortiz, P; Rey-Sanchez, A; Rocha, A; Varlagin, A. 2018. Solar-induced chlorophyll fluorescence is strongly correlated with terrestrial photosynthesis for a wide variety of biomes: First global analysis based on OCO-2 and flux tower observations. Global Change Biology 24(9). Doi.org/10.1111/gcb.14297

  • Lipus, D; Roy, D; Khan, E; Ross, D; Vikram, A; Gulliver, D; Hammack, R; Bibby, K. 2018. Microbial communities in Bakken region produced water. Fems Microbiology Letters 365(12). Doi.org/10.1093/femsle/fny107

  • Loranty, M; Abbott, B; Blok, D; Douglas, T; Epstein, H; Forbes, B; Jones, B; Kholodov, A; Kropp, H; Malhotra, A; Mamet, S; Myers-Smith, I; Natali, S; O'Donnell, J; Phoenix, G; Rocha, A; Sonnentag, O; Tape, K; Walker, D. 2018. Reviews and syntheses: Changing ecosystem influences on soil thermal regimes in northern high-latitude permafrost regions. Biogeosciences 15(17). Doi.org/10.5194/bg-15-5287-2018

  • Marks, R; Doudrick, K. 2018. Investigation of nanostructured MoS2 as an earth abundant catalyst for nitrite hydrogenation. Abstracts of Papers of The American Chemical Society 255. 

  • Mead, M; Castruccio, S; Latif, M; Nadzir, M; Dominick, D; Thota, A; Crippa, P. 2018. Impact of the 2015 wildfires on Malaysian air quality and exposure: a comparative study of observed and modeled data. Environmental Research Letters 13(4). Doi.org/10.1088/1748-9326/aab325

  • Miller, R; Weaver, A; Lieberman, M; Goodson, H. 2018. Development of a portable biosensor for detection of hormones in technology limited settings. Abstracts of Papers of The American Chemical Society 255. 

  • Moore, S; ten Bosch, Q; Siraj, A; Soda, K; Espana, G; Campo, A; Gomez, S; Salas, D; Raybaud, B; Wenger, E; Welkhoff, P; Perkins, T. 2018. Local and regional dynamics of chikungunya virus transmission in Colombia: the role of mismatched spatial heterogeneity. Bmc Medicine 16. Doi.org/10.1186/s12916-018-1127-2

  • Orkis, L; Harrison, L; Mertz, K; Brooks, M; Bibby, K; Stout, J. 2018. Environmental sources of community-acquired legionnaires' disease: A review. International Journal of Hygiene and Environmental Health 221(5). Doi.org/10.1016/j.ijheh.2018.04.013

  • Prather, C; Belovsky, G; Cantrell, S; Gonzalez, G. 2018. Tropical herbivorous phasmids, but not litter snails, alter decomposition rates by modifying litter bacteria. Ecology 99(4). Doi.org/10.1002/ecy.2169

  • Rajagopalan, K; Chinnayakanahalli, K; Stockle, C; Nelson, R; Kruger, C; Brady, M; Malek, K; Dinesh, S; Barber, M; Hamlet, A; Yorgey, G; Adam, J. 2018. Impacts of Near-Term Climate Change on Irrigation Demands and Crop Yields in the Columbia River Basin. Water Resources Research 54(3). Doi.org/10.1002/2017WR020954

  • Schilling, M; Mullen, S; Kronforst, M; Safran, R; Nosil, P; Feder, J; Gompert, Z; Flaxman, S. 2018. Transitions from Single- to Multi-Locus Processes during Speciation with Gene Flow. Genes 9(6). Doi.org/10.3390/genes9060274

  • Schranck, A; Marks, R; Yates, E; Doudrick, K. 2018. Effect of Urine Compounds on the Electrochemical Oxidation of Urea Using a Nickel Cobaltite Catalyst: An Electroanalytical and Spectroscopic Investigation. Environmental Science & Technology 52(15). Doi.org/10.1021/acs.est.8b01743

  • Sharma, A; Woodruff, S; Budhathoki, M; Hamlet, A; Chen, F; Fernando, H. 2018. Role of green roofs in reducing heat stress in vulnerable urban communities-a multidisciplinary approach. Environmental Research Letters 13(9). Doi.org/10.1088/1748-9326/aad93c

  • Shogren, A; Tank, J; Egan, S; August, O; Rosi, E; Hanrahan, B; Renshaw, M; Gantz, C; Bolster, D. 2018. Water Flow and Biofilm Cover Influence Environmental DNA Detection in Recirculating Streams. Environmental Science & Technology 52(15). Doi.org/10.1021/acs.est.8b01822

  • Siraj, A; Rodriguez-Barraquer, I; Barker, C; Tejedor-Garavito, N; Harding, D; Lorton, C; Lukacevic, D; Oates, G; Espana, G; Kraemer, M; Manore, C; Johansson, M; Tatem, A; Reiner, R; Perkins, T. 2018. Spatiotemporal incidence of Zika and associated environmental drivers for the 2015-2016 epidemic in Colombia. Scientific Data 5. Doi.org/10.1038/sdata.2018.73

  • Stachler, E; Akyon, B; de Carvalho, N; Ference, C; Bibby, K. 2018. Correlation of crAssphage qPCR Markers with Culturable and Molecular Indicators of Human Fecal Pollution in an Impacted Urban Watershed. Environmental Science & Technology 52(13). Doi.org/10.1021/acs.est.8b00638

  • Stevens, K; Woeste, K; Chakraborty, S; Crepeau, M; Leslie, C; Martinez-Garcia, P; Puiu, D; Romero-Severson, J; Coggeshall, M; Dandekar, A; Kluepfel, D; Neale, D; Salzberg, S; Langley, C. 2018. Genomic Variation Among and Within Six Juglans Species. G3-Genes Genomes Genetics 8(7). Doi.org/10.1534/g3.118.200030

  • Struck, T; Feder, J; Bendiksby, M; Birkeland, S; Cerca, J; Gusarov, V; Kistenich, S; Larsson, K; Liow, L; Nowak, M; Stedje, B; Bachmann, L; Dimitrov, D. 2018. Cryptic Species - More Than Terminological Chaos: A Reply to Heethoff. Trends in Ecology & Evolution 33(5). Doi.org/10.1016/j.tree.2018.02.008

  • Ten Bosch, Q; Castro-Llanos, F; Manda, H; Morrison, A; Grieco, J; Achee, N; Perkins, T. 2018. Model-based analysis of experimental data from interconnected, row-configured huts elucidates multifaceted effects of a volatile chemical on Aedes aegypti mosquitoes. Parasites & Vectors 11. Doi.org/10.1186/s13071-018-2919-0

  • Ten Bosch, Q; Clapham, H; Lambrechts, L; Duong, V; Buchy, P; Althouse, B; Lloyd, A; Waller, L; Morrison, A; Kitron, U; Vazquez-Prokopec, G; Scott, T; Perkins, T. 2018. Contributions from the silent majority dominate dengue virus transmission. Plos Pathogens 14(5). Doi.org/10.1371/journal.ppat.1006965

  • Trugman, A; Medvigy, D; Mankin, J; anderegg, W. 2018. Soil Moisture Stress as a Major Driver of Carbon Cycle Uncertainty. Geophysical Research Letters 45(13). Doi.org/10.1029/2018GL078131

  • Vizza, C; Pechal, J; Benbow, M; Lang, J; Chatoner, D; Jones, S; Lamberti, G. 2018. Nitrate amendment reduces biofilm biomass and shifts microbial communities in remote, oligotrophic ponds. Freshwater Science 37(2). Doi.org/10.1086/697897

  • Wang, Q; Alappppattu, D; Billingsley, S; Blomquist, B; Burkholder, R; Christman, A; Creegan, E; De Paolo, T; Eleuterio, D; Fernando, H; Franklin, K; Grachev, A; Haack, T; Hanley, T; Hocut, C; Holt, T; Horgan, K; Jonsssson, H; Hale, R; Kalogiros, J; Khelif, D; Leo, L; Lind, R; Lozovatsky, I; Planella-Morato, J; Mukherjee, S; Nussss, W; Pozderac, J; Rogers, L; Savelyev, I; Savidge, D; Shearman, R; Shen, L; Terrill, E; Ulate, A; Wang, Q; Wendt, R; Wissss, R; Woodsds, R; Xu, L; Yamaguchi  ; Yardim  . 2018. CASPER: Coupled Air-Sea Processes and Electromagnetic Ducting Research. Bulletin of The American Meteorological Society 99(7). Doi.org/10.1175/BAMS-D-16-0046.1

  • Wei, N; Chen, Y; Zhu, B. 2018. Surface display enzyme biocatalysts for treating emerging contaminants. Abstracts of Papers of The American Chemical Society 255.

  • Wright, K; Rocha, A. 2018. A test of functional convergence in carbon fluxes from coupled C and N cycles in Arctic tundra. Ecological Modelling 383. Doi.org/10.1016/j.ecolmodel.2018.05.017

  • Xu, X; Medvigy, D; Trugman, A; Guan, K; Good, S; Rodriguez-Iturbe, I. 2018. Tree cover shows strong sensitivity to precipitation variability across the global tropics. Global Ecology and Biogeography 27(4). Doi.org/10.1111/geb.12707

  • Zhong, Q; Hussain, F; Fernando, H. 2018. Quantification of turbulent mixing in colliding gravity currents. Journal of Fluid Mechanics 851. Doi.org/10.1017/jfm.2018.488